Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008753.1 Hibiscus syriacus cultivar Beakdansim tig00111844_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32588

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6868--6991
45
2.7
46
76
8
119
15
25
13
45
1.82
8047--8123
7
11.0
7
98
0
145
58
27
14
0
1.37
11525--11569
20
2.2
20
88
0
63
40
11
22
26
1.87
11596--11630
17
2.1
17
94
0
61
28
8
11
51
1.67
13434--13486
21
2.5
21
96
0
97
26
13
39
20
1.89
15608--15639
2
16.0
2
100
0
64
50
0
0
50
1.00
19710--19741
15
2.1
15
94
0
55
46
25
28
0
1.53
25092--25394
125
2.4
125
87
0
426
35
15
26
22
1.94
26137--26363
36
6.3
36
80
9
232
35
20
19
23
1.96
26135--26363
71
3.2
71
80
6
239
35
20
19
23
1.96
26161--26359
107
1.9
108
86
7
289
37
20
20
22
1.95
26525--26689
41
4.0
41
73
6
145
26
20
21
31
1.98
26510--26688
83
2.2
82
92
1
295
26
20
21
30
1.98
26681--27290
215
2.8
215
86
1
837
33
15
19
31
1.93
27251--27404
77
2.0
76
82
11
188
31
20
20
27
1.97
27355--27542
37
5.1
37
89
1
279
37
20
18
24
1.94
27355--27542
73
2.6
74
87
0
288
37
20
18
24
1.94
28091--28123
16
2.0
17
94
5
59
48
15
36
0
1.45

Tables:   1

The End!