Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008765.1 Hibiscus syriacus cultivar Beakdansim tig00111861_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51336

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1650--1703
24
2.2
24
90
0
81
38
20
16
24
1.92
2760--2820
20
3.0
20
90
0
95
39
21
21
18
1.93
2844--2897
14
3.5
14
77
22
63
11
20
20
48
1.80
2839--2916
33
2.4
33
91
0
120
12
23
21
42
1.87
4908--4974
19
3.5
19
83
4
89
38
23
22
14
1.92
4963--5020
14
3.9
14
79
16
71
48
25
17
8
1.75
4905--5025
32
3.5
32
81
14
143
44
23
19
11
1.84
5547--5591
18
2.5
18
88
0
72
13
15
44
26
1.83
7212--7255
22
2.0
22
95
0
79
18
15
45
20
1.85
7443--7536
20
4.7
20
80
2
89
23
18
24
34
1.96
7423--7537
20
5.7
20
78
5
88
23
17
23
35
1.95
7526--7618
20
4.5
21
78
4
100
17
24
18
39
1.91
7465--7599
41
3.3
41
82
4
139
19
21
20
38
1.94
7526--7618
41
2.3
41
100
0
186
17
24
18
39
1.91
9498--9737
118
2.0
118
99
0
471
55
7
3
34
1.44
9924--10009
23
3.4
24
75
16
68
74
2
10
12
1.16
9924--10037
22
4.7
25
75
19
75
77
3
7
11
1.10
9997--10042
11
4.2
11
83
10
67
80
4
0
15
0.86
14479--14520
20
2.1
20
100
0
84
19
14
14
52
1.75
20890--20938
20
2.4
20
96
3
89
46
4
6
42
1.47
21187--21276
45
2.0
45
86
0
126
21
28
11
38
1.87
22896--23349
240
1.9
238
84
2
615
31
16
23
28
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27311--27343
12
2.6
13
85
9
50
30
0
0
69
0.88
27301--27364
19
3.4
21
82
18
63
28
0
1
70
0.97
27590--27614
3
8.3
3
100
0
50
68
0
0
32
0.90
28593--28643
24
2.1
24
92
0
84
21
21
15
41
1.90
29638--29679
20
2.0
20
86
4
57
14
4
9
71
1.28
29813--29868
25
2.2
25
96
0
103
42
3
28
25
1.71
32060--32130
3
23.7
3
91
0
106
36
2
0
60
1.11
32060--32130
21
3.4
21
96
0
124
36
2
0
60
1.11
32129--32158
14
2.1
15
93
6
53
60
0
0
40
0.97
33517--33556
12
3.1
13
82
10
55
40
0
0
60
0.97
34686--34842
77
2.1
76
86
6
219
28
0
12
59
1.38
34748--34823
33
2.2
34
81
4
82
31
0
7
60
1.25
40029--40238
65
3.2
64
81
12
259
26
18
24
30
1.98
42876--42957
23
3.6
22
78
8
76
24
24
26
24
2.00
42880--42957
21
3.4
23
77
8
72
25
24
25
24
2.00
49492--49707
76
2.8
75
88
6
292
29
1
11
57
1.43
50368--50420
15
3.3
15
76
12
52
20
5
0
73
1.03
50354--50426
20
3.7
20
77
18
64
20
6
1
71
1.17

Tables:   1

The End!