Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008766.1 Hibiscus syriacus cultivar Beakdansim tig00111863_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59032

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10509--10578
35
2.0
34
88
2
104
48
0
2
48
1.16
10509--10590
35
2.3
35
85
4
103
45
1
2
51
1.22
12185--12240
26
2.1
27
83
3
69
35
1
1
60
1.17
12346--12384
13
2.9
14
84
7
62
48
0
12
38
1.42
13195--13235
3
13.7
3
100
0
82
34
0
0
65
0.93
19505--19552
2
24.0
2
100
0
96
50
0
0
50
1.00
21457--21487
15
2.1
15
100
0
62
61
0
0
38
0.96
21453--21484
8
4.2
8
88
11
50
59
0
0
40
0.97
21581--21630
20
2.4
20
86
6
64
56
4
10
30
1.51
42313--42350
20
1.9
20
88
0
58
36
18
13
31
1.89
44025--44110
37
2.3
38
78
15
106
46
0
2
51
1.13
47888--47935
21
2.3
21
96
0
87
22
20
27
29
1.99
48176--48210
18
1.9
18
88
0
52
28
25
5
40
1.78
51679--52075
197
2.0
199
87
6
585
37
14
10
37
1.81
55410--55450
19
2.1
20
95
4
75
14
26
4
53
1.61
56631--56683
2
27.0
2
96
3
99
49
0
0
50
1.00
56983--57023
22
1.9
21
85
5
55
46
4
2
46
1.37

Tables:   1

The End!