Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008767.1 Hibiscus syriacus cultivar Beakdansim tig00111866_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  108381

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2482--2532
21
2.4
21
96
0
93
21
21
27
29
1.99
10117--10163
22
2.1
22
100
0
94
14
27
4
53
1.60
11378--11432
2
28.0
2
96
3
103
49
0
0
50
1.00
14230--14311
29
2.8
29
94
1
137
32
14
9
42
1.79
18997--19078
29
2.8
29
94
1
137
32
14
9
42
1.79
21671--21744
37
2.0
37
97
0
139
36
22
8
32
1.84
24847--24955
35
3.0
36
89
5
166
44
18
6
31
1.75
24888--24947
21
3.2
21
65
30
62
43
20
5
31
1.73
28248--28280
16
2.1
16
100
0
66
57
24
12
6
1.57
28347--28421
10
7.7
10
68
21
52
56
21
13
9
1.65
28352--28415
16
4.0
16
95
0
119
56
23
12
7
1.62
29169--29224
14
4.3
14
76
17
57
55
23
10
10
1.65
29147--29217
24
2.9
24
83
6
81
60
18
8
12
1.57
30598--30706
35
3.0
36
87
5
166
45
19
4
30
1.70
37782--37861
24
3.5
24
86
11
105
53
6
36
3
1.44
37802--37867
21
2.9
24
80
17
86
51
6
37
4
1.47
37856--38181
18
17.4
18
66
19
102
63
2
30
3
1.23
37885--38245
30
12.4
30
86
6
501
63
3
29
3
1.26
37861--38213
12
25.8
12
66
28
99
64
2
30
3
1.23
37880--38225
15
22.5
17
65
22
144
63
3
30
3
1.27
42801--42936
44
3.1
44
85
5
177
30
25
16
27
1.96
44173--44209
17
2.2
17
95
0
65
29
29
16
24
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44581--44667
26
3.3
26
88
1
129
54
26
18
1
1.51
46680--46720
14
3.1
14
76
20
52
41
0
4
53
1.22
48118--48201
37
2.3
38
87
6
120
33
4
19
42
1.72
48608--48641
16
2.1
16
94
0
59
32
8
26
32
1.87
50429--50463
13
2.7
13
95
0
61
31
22
37
8
1.85
52719--52779
21
3.2
21
65
29
64
31
4
21
42
1.74
52711--52829
35
3.3
36
88
5
152
32
4
18
44
1.69
60727--60782
24
2.3
24
96
0
103
25
17
28
28
1.98
65203--65268
27
2.4
27
94
0
114
31
21
13
33
1.92
82490--82537
23
2.0
24
88
4
71
66
0
0
33
0.92
82497--82557
23
2.6
24
85
12
74
63
0
0
36
0.94
82503--82552
20
2.7
18
78
9
55
62
0
0
38
0.96
83779--84011
116
2.0
116
87
1
333
30
20
24
24
1.98
91264--91323
30
2.0
30
83
0
75
11
56
16
15
1.67
95457--95515
27
2.2
26
82
8
66
72
3
6
16
1.20
97367--97406
15
2.7
15
100
0
80
32
12
15
40
1.84

Tables:   1

The End!