Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008780.1 Hibiscus syriacus cultivar Beakdansim tig00111905_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57994

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4053--4239
102
1.8
103
91
6
317
43
16
7
32
1.76
4053--4239
52
3.6
52
89
7
283
43
16
7
32
1.76
7656--7689
15
2.3
15
100
0
68
47
26
0
26
1.53
8399--8453
24
2.3
25
84
6
69
23
14
0
61
1.33
8507--8602
19
5.1
19
87
0
111
29
19
8
42
1.80
11480--11529
3
16.7
3
91
8
84
68
0
0
32
0.90
11905--11967
20
3.2
20
62
20
51
30
15
25
28
1.96
11884--11968
39
2.2
39
95
0
152
31
15
23
29
1.95
13141--13181
15
2.7
16
77
11
50
46
14
19
19
1.84
14888--14953
30
2.2
30
86
0
87
39
25
24
10
1.87
16299--16323
12
2.1
12
100
0
50
48
0
0
52
1.00
24593--24787
97
2.0
97
100
0
390
22
16
12
48
1.79
32607--32656
24
2.1
24
85
7
66
26
2
12
60
1.43
34257--34300
20
2.2
20
84
4
63
65
0
15
18
1.27
41136--41185
24
2.1
24
85
7
66
60
12
2
26
1.43
44156--44225
31
2.2
29
77
20
70
47
0
4
48
1.21
44404--44473
26
2.6
25
82
10
77
52
0
0
47
1.00
44411--44460
17
2.7
20
85
11
63
54
0
0
46
1.00
44671--44760
41
2.2
41
90
6
137
47
20
14
17
1.82

Tables:   1

The End!