Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008781.1 Hibiscus syriacus cultivar Beakdansim tig00111912_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41694

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
641--698
21
2.8
21
75
12
57
55
0
0
44
0.99
632--692
30
2.1
29
87
3
86
52
0
0
47
1.00
633--692
9
6.4
9
74
12
50
53
0
0
46
1.00
905--994
41
2.2
41
90
6
137
47
20
14
17
1.82
7463--7497
18
1.9
18
88
0
52
54
0
17
28
1.43
23803--24433
51
11.7
55
92
2
564
28
25
17
29
1.97
25760--25834
13
5.6
14
73
17
54
5
13
0
81
0.86
25771--25823
26
2.2
23
90
10
79
5
13
0
81
0.86
25805--25834
12
2.4
12
94
5
51
0
10
0
90
0.47
25759--25852
9
10.1
9
71
15
57
5
13
1
79
0.95
25771--25850
20
3.8
20
79
15
63
5
11
1
82
0.88
25772--25898
7
17.4
7
70
13
62
6
15
0
77
1.01
25788--25851
31
2.1
30
85
2
83
4
9
1
84
0.83
25759--25834
26
2.8
26
73
11
73
5
14
0
80
0.88
25765--25840
17
4.2
18
72
18
50
5
13
0
81
0.85
25760--25851
11
8.6
10
70
16
60
5
11
1
81
0.91
26360--41694
7
2207.0
7
97
1
21529
14
5
43
36
1.70

Tables:   1

The End!