Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008791.1 Hibiscus syriacus cultivar Beakdansim tig00111934_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42042

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10474--10501
2
14.0
2
100
0
56
50
0
0
50
1.00
11532--11563
15
2.0
17
88
11
50
25
3
3
68
1.18
12450--12504
28
2.0
28
82
3
67
45
1
3
49
1.30
13624--13670
23
2.1
22
84
4
58
48
0
2
48
1.13
15746--15778
14
2.5
13
90
9
57
57
0
0
42
0.98
23657--23699
23
1.9
23
86
13
63
18
6
4
69
1.29
24040--24064
2
12.5
2
100
0
50
52
0
0
48
1.00
29945--30000
12
4.5
12
74
12
51
57
1
1
39
1.20
30715--30757
16
2.6
16
85
7
52
58
4
4
32
1.39
31991--32045
28
2.0
27
82
13
67
58
16
14
10
1.64
33409--33532
25
5.0
25
94
1
205
29
15
20
34
1.93
33661--33703
3
14.7
3
81
13
54
65
0
0
34
0.93
33661--33703
13
3.4
13
84
9
54
65
0
0
34
0.93
33657--33708
18
3.1
16
76
15
52
65
0
0
34
0.93
33886--34170
40
6.4
43
64
19
136
26
17
29
25
1.98
33911--34112
91
2.2
91
97
0
377
28
16
28
25
1.97
34002--34302
141
2.2
134
80
7
343
26
17
28
27
1.98
35252--35288
8
4.5
8
86
6
56
10
13
0
75
1.04

Tables:   1

The End!