Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008792.1 Hibiscus syriacus cultivar Beakdansim tig00111936_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28534

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8528--8570
16
2.6
16
85
7
52
58
4
4
32
1.39
11240--11338
25
4.0
25
92
3
157
29
15
20
35
1.93
11466--11511
15
3.0
15
79
20
51
65
0
0
34
0.93
11841--11868
3
9.3
3
100
0
56
32
0
0
67
0.91
16367--16420
21
2.6
21
84
0
63
18
22
24
35
1.96
24172--24211
22
1.9
20
90
10
62
27
27
5
40
1.77
24207--24240
12
2.9
12
91
4
52
41
26
2
29
1.70
24608--24632
12
2.1
12
100
0
50
28
24
24
24
2.00

Tables:   1

The End!