Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000088.1 Hibiscus syriacus cultivar Beakdansim tig00000161_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48525

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6211--6720
253
2.0
252
93
1
880
43
10
15
30
1.81
19273--19317
20
2.2
20
100
0
90
11
28
31
28
1.91
21983--22061
2
39.5
2
100
0
158
50
0
0
49
1.00
26517--26552
15
2.4
15
100
0
72
22
13
33
30
1.93
29521--29563
18
2.4
18
92
7
70
55
0
0
44
0.99
29796--29859
27
2.3
28
81
13
78
56
0
3
40
1.15
29841--29909
21
2.9
22
79
16
68
52
0
4
43
1.21
29836--29904
23
3.0
23
72
19
63
52
0
4
43
1.21
30633--30709
31
2.5
31
91
0
118
50
12
7
28
1.68
31136--31169
17
2.0
17
88
0
50
29
0
2
67
1.05
32282--32327
17
2.5
20
79
13
62
45
0
4
50
1.21
37310--37364
27
2.0
27
85
0
74
29
7
34
29
1.84
47459--47505
12
3.9
12
76
18
53
31
0
2
65
1.04
47502--47558
28
2.2
28
84
12
77
40
0
1
57
1.09
47459--47569
12
9.4
12
68
23
51
36
0
1
61
1.07
47467--47636
63
2.7
61
80
13
170
39
0
1
58
1.13
47468--47619
60
2.6
59
83
12
181
39
0
1
58
1.09
47468--47636
60
2.8
59
80
15
156
39
0
1
57
1.13
47470--47661
60
3.3
59
78
15
145
39
0
1
58
1.12
47631--47666
16
2.2
17
90
5
56
36
0
0
63
0.94
47968--48006
17
2.2
17
86
4
51
51
5
0
43
1.24

Tables:   1

The End!