Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008801.1 Hibiscus syriacus cultivar Beakdansim tig00111951_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46671

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2266--2300
18
1.9
18
88
0
52
28
17
0
54
1.43
12524--12558
18
1.9
18
88
0
52
28
17
0
54
1.43
13875--13911
13
2.8
13
95
0
65
13
24
45
16
1.83
16602--16682
3
27.0
3
82
0
90
64
0
3
32
1.11
16602--16684
18
4.4
18
82
8
103
65
0
3
31
1.10
16929--17614
118
5.8
119
96
2
1221
27
20
13
38
1.91
16929--17614
237
2.9
235
95
2
1213
27
20
13
38
1.91
18168--18725
52
10.7
52
97
0
1053
37
24
15
23
1.93
19304--19341
16
2.4
16
82
8
51
57
7
5
28
1.49
19660--19732
6
12.0
6
72
18
62
2
17
0
79
0.85
19659--19732
9
7.7
10
76
18
77
2
18
0
78
0.87
19660--19732
35
2.2
33
85
11
96
2
17
0
79
0.85
19664--19732
29
2.4
27
83
11
77
2
17
0
79
0.85
19660--19725
19
3.6
18
69
22
57
3
18
0
78
0.87
30267--30301
18
1.9
18
88
11
54
62
2
0
34
1.10
32430--32515
3
29.0
3
84
2
111
62
0
3
33
1.12
32432--32529
12
8.9
11
77
18
64
63
0
5
31
1.16
32439--32524
18
4.8
18
85
2
111
60
0
5
33
1.21
35591--35625
18
1.9
18
88
0
52
28
17
0
54
1.43
36925--36949
13
1.9
13
100
0
50
20
24
40
16
1.91
36916--36963
18
2.5
19
86
10
62
20
22
41
14
1.89
36922--36989
31
2.2
31
89
5
102
17
22
44
16
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42343--42378
3
12.0
3
93
0
63
66
2
0
30
1.06

Tables:   1

The End!