Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008807.1 Hibiscus syriacus cultivar Beakdansim tig00111960_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68633

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5404--5500
31
3.1
31
92
5
153
21
22
13
42
1.88
8441--8514
31
2.4
31
84
4
96
27
21
10
40
1.86
11702--11761
23
2.6
23
81
0
66
33
11
5
50
1.61
16252--16471
45
4.9
45
92
2
363
30
21
6
40
1.79
21070--21116
8
6.0
8
82
5
60
82
2
12
2
0.84
21073--21116
15
2.9
15
82
3
61
84
2
11
2
0.81
21076--21154
11
6.7
13
72
21
68
78
1
13
6
1.00
21076--21153
23
3.3
23
82
12
97
79
1
14
5
0.96
24211--24390
94
1.8
97
85
11
251
35
17
10
37
1.84
24279--24358
36
2.2
36
76
10
83
40
18
8
32
1.82
25398--25442
19
2.4
18
88
3
63
17
11
2
68
1.29
25696--25741
16
3.0
16
73
20
53
36
6
8
47
1.60
27140--27186
20
2.3
20
96
0
85
38
23
14
23
1.92
27294--27340
18
2.6
18
96
0
85
31
23
27
17
1.96
27507--28594
553
2.0
551
91
1
1779
32
18
15
33
1.93
32269--32306
18
2.1
18
90
0
58
21
10
36
31
1.87
41304--41352
20
2.4
22
77
19
61
36
0
2
61
1.08
41326--41363
16
2.4
16
78
4
51
44
0
0
55
0.99
47903--47950
24
2.0
23
84
11
62
66
2
0
31
1.03
48974--49028
28
2.0
29
86
10
80
49
5
0
45
1.25
49254--49292
12
3.0
13
85
7
53
48
0
2
48
1.15
49258--49292
13
2.8
12
87
12
52
51
0
2
45
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49546--49581
17
2.1
18
89
5
56
16
27
0
55
1.42
49780--49869
32
2.8
32
79
12
103
27
17
13
41
1.87
49790--49923
32
4.2
32
77
1
117
26
17
16
38
1.91
50392--50462
32
2.2
32
89
0
106
25
15
16
42
1.88
52833--52863
13
2.4
13
94
0
53
32
6
9
51
1.60
54629--54662
13
2.6
13
90
9
52
47
5
17
29
1.71
55127--55178
23
2.4
22
84
9
63
26
25
25
23
2.00
55137--55200
23
2.8
23
82
0
83
26
23
29
20
1.99
59332--59371
21
1.9
21
85
10
55
35
7
2
55
1.42
64828--64896
35
2.0
35
85
2
95
30
14
17
37
1.90
68511--68553
13
3.1
14
80
12
54
41
6
9
41
1.64

Tables:   1

The End!