Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008810.1 Hibiscus syriacus cultivar Beakdansim tig00111964_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34030

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79--147
19
3.7
19
81
14
74
36
1
0
62
1.04
85--146
26
2.5
25
84
7
81
35
1
0
62
1.05
1372--1622
141
1.8
138
82
10
323
37
6
7
48
1.57
7125--7164
11
3.5
11
86
6
62
0
7
2
90
0.55
7126--7164
1
39.0
1
86
0
51
0
5
2
92
0.46
7614--7665
3
18.0
3
84
7
72
67
0
1
30
1.02
7614--7664
23
2.2
23
89
6
77
68
0
1
29
1.00
8066--8147
42
2.0
41
87
2
119
30
23
19
26
1.98
7916--8718
232
3.5
233
86
1
1148
34
17
15
33
1.91
17336--17362
6
4.5
6
100
0
54
70
0
0
29
0.88
18742--18792
3
17.7
3
76
15
54
64
0
1
33
1.05
22340--22385
20
2.3
20
86
13
69
56
8
17
17
1.65
22505--22550
20
2.3
19
78
10
56
54
8
17
19
1.68
24839--24904
33
2.0
33
87
0
96
28
1
45
24
1.62
26668--26706
19
2.1
19
95
0
69
33
2
10
53
1.48
26712--26746
17
2.1
17
100
0
70
42
0
17
40
1.49
26805--28762
196
10.1
197
91
7
3203
37
15
15
32
1.88
30206--30296
12
7.4
12
78
9
67
35
7
35
21
1.83
30218--30300
3
28.0
3
76
2
78
34
6
34
24
1.80
31644--32472
181
4.6
182
95
4
1447
35
15
15
33
1.89
31644--32472
363
2.3
358
94
4
1451
35
15
15
33
1.89

Tables:   1

The End!