Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008811.1 Hibiscus syriacus cultivar Beakdansim tig00111969_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45480

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7193--7595
81
5.0
81
85
3
517
36
11
20
30
1.89
7595--7795
46
4.4
46
83
2
260
43
13
21
21
1.87
7593--7822
92
2.5
92
82
1
273
43
13
19
23
1.87
12987--13225
81
3.0
81
88
1
345
34
11
20
33
1.89
13228--13443
46
4.7
45
85
4
272
43
12
22
22
1.86
18019--18082
13
4.9
13
84
0
74
28
18
25
28
1.98
17885--18043
85
1.9
85
80
5
187
28
19
20
32
1.97
18017--18082
26
2.5
26
80
0
87
27
19
24
28
1.99
22625--22786
59
2.7
59
71
15
138
27
28
25
18
1.98
25216--25244
8
3.6
8
100
0
58
55
13
0
31
1.39
34898--34967
35
2.0
35
86
5
97
37
17
14
31
1.89
35527--35563
14
2.6
15
83
12
51
48
8
2
40
1.47
38525--38563
20
2.0
20
84
0
51
17
41
12
28
1.87
44651--44715
22
3.0
23
68
20
59
21
24
26
27
1.99
45181--45213
13
2.5
13
90
9
50
30
18
6
45
1.73

Tables:   1

The End!