Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008829.1 Hibiscus syriacus cultivar Beakdansim tig00112011_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58518

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5854--5985
62
2.1
63
95
1
239
33
17
10
38
1.84
6837--6877
22
1.9
22
85
5
57
29
9
2
58
1.43
8901--9043
64
2.2
64
83
10
168
30
15
24
30
1.96
9888--9984
33
3.0
32
91
5
151
11
9
38
41
1.73
27660--28142
136
3.5
139
81
7
533
25
21
17
36
1.95
28076--28484
105
3.9
105
90
2
622
21
22
18
37
1.94
33846--33870
12
2.1
12
100
0
50
40
16
20
24
1.91
41526--41576
24
2.1
24
85
7
68
66
9
1
21
1.31
43252--43287
18
1.9
18
88
5
54
50
0
0
50
1.00
43370--43410
21
2.0
20
90
4
64
65
2
4
26
1.25
44853--44898
3
15.0
3
86
4
65
60
0
0
39
0.97
56810--57178
20
18.5
20
84
5
442
34
26
18
20
1.95
57855--57899
22
2.0
23
86
8
65
24
13
22
40
1.90
58067--58091
12
2.1
12
100
0
50
72
0
28
0
0.86

Tables:   1

The End!