Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008833.1 Hibiscus syriacus cultivar Beakdansim tig00112027_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27241

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5041--5099
5
11.8
5
94
0
73
6
40
37
15
1.74
5097--5151
6
9.2
6
95
0
92
3
16
49
30
1.63
5426--5480
22
2.5
22
75
0
56
29
9
23
38
1.85
9575--9656
27
3.0
27
96
0
146
12
45
7
35
1.69
9588--9658
13
5.3
13
68
18
56
11
47
7
33
1.66
12588--12644
20
2.8
20
89
0
87
45
3
21
29
1.68
12589--12652
20
3.3
20
86
4
78
48
3
18
29
1.64
14030--14092
23
2.7
23
95
0
117
26
19
17
36
1.94
15130--15196
31
2.2
31
79
15
77
37
7
5
49
1.56
15128--15192
29
2.3
27
77
15
67
36
7
6
49
1.57
15315--15600
143
2.0
142
99
0
563
33
9
14
41
1.78
16120--16175
24
2.3
24
100
0
112
23
30
14
32
1.94

Tables:   1

The End!