Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008835.1 Hibiscus syriacus cultivar Beakdansim tig00112034_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40002

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--776
123
6.7
114
79
14
546
39
14
18
26
1.90
211--776
123
4.7
123
85
6
707
39
14
18
26
1.90
954--1010
17
3.2
19
69
20
59
50
8
21
19
1.74
1199--1280
21
4.0
21
82
1
94
31
34
24
9
1.88
3535--3559
2
12.5
2
100
0
50
48
0
0
52
1.00
7070--7162
42
2.2
42
88
1
134
31
22
21
24
1.98
7084--8134
215
4.9
215
89
3
1594
32
19
15
33
1.93
7084--8134
426
2.5
420
89
4
1567
32
19
15
33
1.93
8138--8343
35
5.9
34
88
3
261
21
19
23
35
1.96
8137--8343
34
6.0
34
89
2
263
21
19
23
36
1.95
8137--8343
103
2.0
103
85
8
285
21
19
23
36
1.95
12994--13121
54
2.3
55
93
4
215
20
22
13
43
1.86
14068--14144
25
3.2
23
78
12
68
31
5
1
62
1.25
24755--24793
17
2.3
17
86
8
53
74
0
15
10
1.07
24756--24800
23
2.0
23
91
4
74
75
0
15
8
1.03
25168--25202
18
1.9
18
94
0
61
34
5
5
54
1.48
26601--27128
122
4.3
122
90
3
749
39
14
19
26
1.90
26376--27127
244
3.2
240
84
9
886
39
14
18
26
1.90
27169--27215
3
15.3
3
78
12
51
34
0
2
63
1.06
28742--28767
4
6.5
4
100
0
52
23
0
0
76
0.78

Tables:   1

The End!