Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008837.1 Hibiscus syriacus cultivar Beakdansim tig00112041_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58080

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3889--3926
20
1.9
20
88
0
58
31
15
23
28
1.96
7829--7863
15
2.2
16
90
5
54
48
0
0
51
1.00
8124--8222
26
3.7
27
81
14
91
55
0
3
41
1.15
8154--8219
24
2.7
23
88
9
78
53
0
3
43
1.16
8179--8250
24
2.9
24
82
14
67
52
0
6
40
1.28
11766--11874
54
2.0
54
100
0
218
27
16
18
37
1.92
13778--13833
15
3.6
15
79
9
67
42
12
12
32
1.80
13781--13831
17
3.1
17
77
11
61
43
11
9
35
1.75
14228--14282
13
4.2
13
75
13
58
49
12
3
34
1.59
14268--14366
33
3.0
33
94
1
164
45
15
7
32
1.73
14361--14400
21
1.9
21
94
0
71
47
7
15
30
1.72
18460--18521
29
2.1
29
100
0
124
50
9
16
24
1.75
22785--22860
37
2.1
37
100
0
152
21
21
42
15
1.89
23599--23761
75
2.2
75
85
2
211
30
1
11
56
1.43
23654--23722
32
2.2
32
82
10
79
26
1
10
62
1.35
23707--23752
19
2.5
19
80
16
53
30
0
15
54
1.41
23716--23753
19
2.0
19
89
0
58
31
0
15
52
1.43
23690--23817
65
2.0
65
87
6
188
30
0
12
57
1.36
23635--23783
75
2.0
75
85
1
183
29
0
12
57
1.41
27414--27449
14
2.5
14
90
4
54
19
13
0
66
1.24
27443--27473
11
2.8
11
95
0
53
19
0
0
80
0.71
29834--29909
22
3.5
22
80
7
82
32
25
17
25
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31064--31104
21
2.0
21
85
0
55
34
9
2
53
1.47
31128--31174
21
2.2
21
84
0
58
63
8
10
17
1.49
37303--37343
17
2.4
17
87
0
55
48
9
7
34
1.64
37949--38037
28
3.1
28
65
15
74
32
10
7
49
1.65
37931--38042
57
2.0
57
94
3
201
31
9
8
50
1.66
43359--43516
55
2.9
54
81
6
187
23
22
21
32
1.98
43510--44186
55
12.3
55
89
1
953
28
24
15
31
1.95
45187--45239
8
6.5
8
80
10
54
9
11
0
79
0.94
45189--45240
15
3.3
15
78
5
50
9
13
0
76
1.01
55373--55417
4
11.0
4
97
2
81
75
0
0
24
0.80

Tables:   1

The End!