Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000884.1 Hibiscus syriacus cultivar Beakdansim tig00001720_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  117037

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6291--6334
12
3.8
12
78
6
54
13
15
6
63
1.49
8424--8474
19
2.6
20
90
3
77
43
5
15
35
1.71
11780--11804
8
3.1
8
100
0
50
0
24
0
76
0.80
13494--13553
30
2.0
31
83
3
77
51
10
10
28
1.67
14525--15730
597
2.0
605
91
2
1982
33
16
16
33
1.91
18583--18655
36
2.0
36
94
0
128
31
8
13
46
1.73
19160--19214
23
2.3
25
81
6
69
61
10
14
12
1.56
32616--32653
16
2.4
16
95
0
67
23
39
5
31
1.77
43162--43214
23
2.3
23
78
12
56
47
0
9
43
1.36
55144--55221
35
2.2
34
82
6
93
29
33
3
33
1.76
60792--60877
35
2.5
35
86
0
109
32
37
3
26
1.74
79527--79575
19
2.5
20
77
19
57
59
2
10
28
1.41
90215--90269
10
5.5
10
80
8
67
0
3
10
85
0.72
90215--90269
11
5.4
11
82
12
55
0
3
10
85
0.72
90215--90269
20
2.8
20
85
0
74
0
3
10
85
0.72
90215--90270
29
1.9
29
92
0
94
0
3
12
83
0.76
93598--93642
19
2.3
19
84
3
54
28
8
11
51
1.68
99930--99982
17
3.1
17
88
0
79
37
15
5
41
1.70
102836--102868
17
1.9
17
88
11
50
45
6
6
42
1.53
108053--108116
17
3.8
17
77
8
67
42
10
10
35
1.75
110025--110077
24
2.3
23
80
6
61
58
15
15
11
1.63
110072--110103
16
2.1
16
94
5
57
78
3
18
0
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
110067--110104
19
2.0
19
85
10
51
76
2
21
0
0.91

Tables:   1

The End!