Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008847.1 Hibiscus syriacus cultivar Beakdansim tig00112057_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67956

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1096--1231
30
4.6
29
71
8
112
59
9
11
19
1.59
3283--3355
20
3.7
20
94
0
110
28
21
32
16
1.95
3390--3432
22
1.9
23
90
4
70
20
20
32
25
1.97
3970--4164
85
2.3
86
93
0
329
27
16
26
29
1.97
3981--4116
43
3.2
43
63
10
98
29
15
26
28
1.96
5307--5338
14
2.3
14
94
0
55
21
0
31
46
1.52
9330--9440
45
2.6
43
82
8
145
19
53
8
18
1.70
9330--9456
45
2.9
46
77
6
138
20
54
7
18
1.66
9331--9464
42
3.1
42
78
10
144
20
54
6
18
1.66
9663--9702
21
1.9
21
84
0
53
30
52
2
15
1.55
18897--18930
18
1.9
17
88
5
50
32
29
20
17
1.96
21034--21079
24
1.9
24
81
0
56
58
6
2
32
1.36
23258--23380
5
25.2
5
66
14
53
70
2
4
21
1.18
23254--23429
4
40.2
4
69
20
63
69
3
5
22
1.23
23258--23423
14
11.7
14
65
16
67
69
3
4
22
1.23
23257--23360
34
3.0
34
71
14
86
73
2
4
19
1.15
23243--23303
19
3.3
19
80
13
74
77
3
3
16
1.04
23566--23605
3
14.0
3
80
19
50
65
0
0
35
0.93
23568--23651
23
3.5
24
75
6
91
65
1
2
30
1.13
23575--23681
48
2.3
46
79
10
119
67
1
3
27
1.18
23662--23702
20
2.0
21
85
4
57
68
0
7
24
1.15
23696--23847
2
78.5
2
72
13
77
51
1
4
42
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23784--23837
26
2.0
29
89
10
87
51
0
5
42
1.25
24041--24078
19
2.0
19
94
0
67
65
0
5
28
1.14
23443--24137
378
1.8
377
85
8
973
53
4
10
31
1.54
37470--37589
5
24.6
5
66
21
51
73
3
5
18
1.16
37468--37531
17
3.9
17
75
15
64
68
4
7
18
1.32
37504--37682
4
40.8
4
72
16
83
70
2
5
21
1.20
37503--37683
9
19.4
9
72
16
90
70
2
4
21
1.19
37470--37588
32
3.7
32
80
10
109
73
3
5
18
1.16
37469--37608
45
2.9
46
78
10
113
71
2
5
20
1.19
37813--37852
3
14.0
3
80
19
50
65
0
0
35
0.93
37813--37901
23
3.9
22
74
12
90
67
1
3
28
1.14
37828--37931
47
2.1
47
82
8
120
69
1
4
24
1.18
37904--37944
20
2.0
21
85
4
57
68
0
7
24
1.15
38025--38129
2
53.0
2
89
5
160
49
0
1
48
1.12
38219--38306
3
29.0
3
73
21
51
63
1
3
31
1.18
37700--38473
406
1.9
405
85
7
1088
54
4
9
32
1.51
56475--56571
3
31.7
3
80
8
106
38
2
0
59
1.09
57795--57834
21
2.0
21
90
9
66
47
0
0
52
1.00
57779--57832
17
3.3
17
72
12
51
48
0
1
50
1.11
60051--60092
7
6.0
7
81
8
50
14
16
14
54
1.71
60051--60092
15
3.0
14
83
10
50
14
16
14
54
1.71
60151--60209
26
2.3
26
84
0
82
22
11
8
57
1.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64310--64785
83
5.7
83
93
1
749
27
12
22
37
1.91
65839--66000
74
2.2
74
84
4
202
33
17
20
28
1.95
67282--67336
22
2.5
22
96
0
101
34
14
14
36
1.87

Tables:   1

The End!