Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008848.1 Hibiscus syriacus cultivar Beakdansim tig00112058_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87735

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16156--16246
3
29.7
3
75
12
78
38
2
0
59
1.10
16154--16240
19
4.9
19
73
10
78
40
2
0
57
1.11
17573--17611
19
2.0
20
90
5
62
46
0
0
53
1.00
19814--19855
7
6.0
7
81
8
50
14
16
14
54
1.71
19814--19855
15
3.0
14
83
10
50
14
16
14
54
1.71
19915--19973
26
2.3
26
84
0
82
22
11
8
57
1.61
24070--24545
83
5.7
83
93
1
749
27
12
22
37
1.91
25601--25762
74
2.2
74
84
4
202
33
17
20
28
1.95
27051--27105
22
2.5
22
96
0
101
34
14
14
36
1.87
27574--28937
113
12.2
112
88
4
1773
37
14
19
29
1.91
27574--28937
449
3.1
449
90
3
2037
37
14
19
29
1.91
27574--28937
562
2.4
562
91
3
2166
37
14
19
29
1.91
28672--28877
100
2.1
100
91
1
333
37
11
21
29
1.89
29328--29424
3
31.7
3
80
8
106
38
2
0
59
1.09
30740--30783
21
2.1
21
87
8
63
47
0
0
52
1.00
38572--38618
23
2.1
23
84
4
60
23
4
2
70
1.16
38697--38746
18
2.6
19
80
17
59
24
0
10
66
1.22
42225--42362
62
2.2
62
97
0
258
26
18
34
21
1.96
45524--45629
21
5.1
21
77
10
110
48
10
3
37
1.56
45524--45757
42
5.4
42
75
8
191
49
7
3
40
1.47
45636--45770
21
6.4
21
81
2
146
51
3
1
42
1.28
45637--45770
11
12.7
11
76
15
122
52
2
1
43
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46125--46176
20
2.7
21
82
14
67
69
0
3
26
1.06
46111--46200
22
3.8
24
72
24
68
66
1
6
25
1.23
47522--47606
38
2.3
37
89
4
127
44
9
4
41
1.57
47522--47668
36
4.1
36
79
6
145
42
8
3
45
1.52
47538--47668
35
3.6
36
81
6
133
41
7
2
48
1.44
47643--47687
22
2.1
21
91
4
72
46
13
0
40
1.43
47765--48062
21
14.2
21
85
0
391
47
7
6
38
1.59
48970--49227
11
24.4
11
67
17
73
40
2
4
52
1.36
48970--49267
21
14.1
21
78
9
257
39
2
5
52
1.37
49021--49379
42
8.4
42
75
9
312
41
3
4
49
1.42
49021--49379
63
5.6
63
76
8
296
41
3
4
49
1.42
49173--49361
92
2.1
91
81
7
213
41
4
6
47
1.50
49263--49379
21
5.6
21
80
0
117
44
5
3
46
1.44
51021--51174
29
5.3
29
83
2
157
44
16
5
33
1.70
51036--51174
57
2.4
59
82
5
160
44
15
5
33
1.71
51190--51227
19
2.0
19
94
0
67
21
34
28
15
1.94
51954--52022
21
3.3
21
89
0
102
44
10
4
40
1.58
54424--54546
64
1.9
64
83
5
158
28
24
15
31
1.95
56483--56522
21
1.9
21
89
0
62
55
7
7
30
1.56
62371--62409
16
2.4
16
83
8
53
15
0
23
61
1.33
62810--62859
17
3.1
17
68
26
54
52
22
6
20
1.68
63873--63918
2
23.5
2
95
4
85
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63907--63955
24
2.0
24
84
8
62
34
0
30
34
1.58
65791--74789
7
1295.0
7
97
1
5844
12
12
44
30
1.79
67031--87727
7
3001.9
7
96
3
30247
14
4
43
38
1.66

Tables:   1

The End!