Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008849.1 Hibiscus syriacus cultivar Beakdansim tig00112059_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43675

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15471--15531
29
2.1
29
84
0
77
42
8
8
40
1.64
15628--15699
30
2.4
29
81
4
81
38
8
8
44
1.65
25221--25578
177
2.0
177
98
0
698
35
12
11
40
1.80
28595--28646
21
2.4
21
83
3
68
42
0
1
55
1.10
28728--28784
20
2.7
21
86
8
89
33
22
8
35
1.85
28984--29033
15
3.4
15
68
15
50
46
2
0
52
1.12
28986--29064
25
3.1
23
80
14
68
43
2
1
53
1.22
29298--29338
22
1.9
21
85
14
57
4
26
0
68
1.10
31144--31186
24
1.9
23
81
13
54
32
2
9
55
1.44
31338--31421
2
42.0
2
100
0
168
50
0
0
50
1.00
32079--32121
22
2.0
21
90
4
68
39
4
2
53
1.34

Tables:   1

The End!