Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008851.1 Hibiscus syriacus cultivar Beakdansim tig00112062_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70161

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6360--6429
31
2.2
32
82
7
90
28
20
14
37
1.91
8850--8912
30
2.1
31
85
11
87
36
14
25
23
1.93
19394--19483
36
2.5
36
83
3
119
31
20
26
22
1.98
20083--20149
34
2.0
33
97
2
125
38
0
1
59
1.06
20092--20166
33
2.2
34
88
2
107
42
1
1
54
1.17
20958--21019
32
1.9
31
87
9
88
54
11
6
27
1.60
21188--21249
32
1.9
32
90
0
97
17
24
12
45
1.84
21337--21439
3
34.7
3
90
1
163
33
1
0
63
1.12
23568--23605
15
2.8
13
88
11
51
23
5
2
68
1.23
34110--34171
17
3.6
17
86
0
88
80
0
19
0
0.71
34138--34170
10
3.3
10
91
8
50
90
0
9
0
0.44
35284--35900
83
7.4
83
91
1
1004
28
12
21
37
1.90
35316--35900
249
2.3
249
97
0
1107
27
12
21
37
1.90
36700--37251
114
4.8
114
91
2
824
39
12
19
29
1.88
37578--37678
3
33.7
3
91
0
166
33
1
0
63
1.12
39100--39146
14
3.5
13
80
13
51
40
2
2
55
1.24
40388--40462
37
2.0
37
97
0
141
38
30
5
25
1.78
41007--41038
15
2.1
15
94
0
55
46
6
9
37
1.61
42192--42238
17
2.9
15
75
25
51
21
12
2
63
1.39
42228--42306
27
2.9
26
83
12
88
25
0
5
69
1.08
49420--49457
19
2.0
20
85
10
53
23
7
10
57
1.58
51314--51360
21
2.2
21
96
0
85
48
21
17
12
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66155--66187
13
2.4
14
95
5
59
39
0
18
42
1.50
66184--66284
7
14.1
7
70
22
68
37
4
2
54
1.37
66276--66330
4
13.8
4
74
14
51
23
3
1
70
1.12
67717--67758
20
2.0
21
86
4
59
45
4
0
50
1.23
69782--69947
49
3.4
49
91
0
269
24
21
16
38
1.92

Tables:   1

The End!