Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008852.1 Hibiscus syriacus cultivar Beakdansim tig00112068_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47187

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
808--905
42
2.4
42
81
8
112
23
21
23
31
1.98
691--1110
220
1.9
217
87
4
612
33
15
15
35
1.89
1741--1847
24
4.6
24
86
5
132
37
3
0
58
1.16
1741--1829
3
29.7
3
88
4
135
34
3
0
61
1.12
8880--8908
14
2.1
14
100
0
58
34
6
6
51
1.55
10795--10828
12
2.8
12
95
0
59
41
20
8
29
1.82
16528--16576
2
24.5
2
100
0
98
51
0
0
48
1.00
17118--17562
55
8.1
54
82
6
439
36
17
15
30
1.91
19630--19773
55
2.6
56
86
6
197
36
12
17
33
1.87
19957--20348
68
5.8
68
89
3
556
29
15
23
31
1.95
19966--20345
204
1.9
204
93
0
661
28
15
23
32
1.95
20344--20400
29
2.0
29
100
0
114
42
10
21
26
1.85
28448--28478
8
3.8
8
95
4
53
61
0
3
35
1.12
28830--28869
21
1.9
21
89
0
62
10
25
40
25
1.86
28850--28912
20
2.9
21
79
9
65
15
25
34
23
1.95
36293--36437
55
2.6
55
90
4
213
27
25
17
28
1.98
44824--44862
15
2.5
15
87
4
51
15
12
5
66
1.41
45206--45258
10
5.5
10
80
6
56
77
13
9
0
0.99

Tables:   1

The End!