Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008858.1 Hibiscus syriacus cultivar Beakdansim tig00112081_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30824

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7384--7564
64
2.8
65
82
5
172
28
17
25
29
1.97
7512--7562
19
2.7
19
80
19
63
27
15
33
23
1.95
7405--7564
65
2.5
65
85
5
209
28
16
25
30
1.97
7781--7820
20
2.0
21
85
14
57
45
7
5
42
1.54
13306--13568
95
2.8
92
65
22
204
40
7
6
45
1.57
15690--15920
118
2.0
118
89
1
356
31
24
11
32
1.91
24960--25001
20
2.1
20
100
0
84
26
26
4
42
1.75
28697--28745
21
2.3
21
82
6
55
18
8
8
65
1.44
30301--30325
9
2.8
9
100
0
50
80
0
0
20
0.72
30490--30523
10
3.8
9
88
11
52
79
0
0
20
0.73

Tables:   1

The End!