Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008859.1 Hibiscus syriacus cultivar Beakdansim tig00112082_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67518

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8522--8580
30
1.9
32
82
6
77
61
1
6
30
1.32
10710--10773
3
22.7
3
83
12
82
62
0
1
35
1.05
10710--10780
17
4.2
17
82
12
92
60
0
4
35
1.16
10712--10773
14
4.7
13
84
7
81
62
0
1
35
1.05
17353--17704
44
8.0
44
85
1
456
41
11
21
25
1.87
17353--17689
175
1.9
175
87
3
491
41
11
20
26
1.86
20385--20424
16
2.6
16
92
4
64
52
0
7
40
1.30
21284--21339
29
1.9
29
88
0
85
35
19
10
33
1.87
21325--21382
21
2.8
21
86
0
71
25
20
13
39
1.90
27752--27931
89
2.0
89
98
0
351
38
18
12
30
1.87
33374--33439
21
3.1
21
86
0
96
31
24
16
27
1.96
37142--37181
20
2.0
20
85
0
53
25
35
0
40
1.56
37193--37255
12
5.6
12
74
14
62
31
0
1
66
1.01
42946--42973
14
2.0
14
100
0
56
50
7
7
35
1.57
44311--44349
20
1.9
21
94
5
71
51
0
0
48
1.00
44311--44351
16
2.5
17
80
7
50
48
0
0
51
1.00
44460--44525
24
2.8
24
97
0
123
31
0
9
59
1.29
44936--45006
28
2.4
30
86
9
94
38
7
23
30
1.82
46106--46146
20
2.0
20
85
4
55
43
2
7
46
1.44
47912--47960
18
2.8
17
78
3
53
67
0
8
24
1.18
47894--47961
21
3.0
21
75
12
55
66
0
10
23
1.22
48106--48146
20
2.1
19
86
4
55
58
0
2
39
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49143--49183
16
2.6
16
82
17
50
56
0
0
43
0.99
49396--49437
20
2.1
20
90
0
66
33
16
23
26
1.96
49518--50127
105
5.8
105
99
0
1202
22
18
25
32
1.97
50320--50346
1
27.0
1
100
0
54
0
0
0
100
0.00
61650--61677
14
2.0
14
100
0
56
78
0
14
7
0.95
62109--62157
18
2.8
17
78
3
53
67
0
8
24
1.18
62091--62158
21
3.0
21
75
12
55
66
0
10
23
1.22

Tables:   1

The End!