Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008860.1 Hibiscus syriacus cultivar Beakdansim tig00112084_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59923

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6210--6259
18
2.8
18
78
0
55
68
0
8
24
1.16
6310--6352
3
13.3
3
90
4
50
62
2
0
34
1.08
7445--7485
16
2.6
16
82
17
50
56
0
0
43
0.99
11887--11941
14
3.9
14
77
13
51
41
5
1
50
1.36
12033--12238
40
4.4
47
68
18
142
48
1
3
47
1.27
12078--12121
15
2.9
15
89
0
61
54
0
0
45
0.99
11966--12262
141
2.1
139
95
1
531
47
1
4
46
1.29
12295--12349
27
2.0
28
92
3
94
52
0
0
47
1.00
12402--12519
38
3.1
39
73
10
100
56
2
0
39
1.19
16871--16986
49
2.4
49
97
0
214
35
27
17
19
1.94
20341--20380
20
2.1
19
90
4
62
40
17
25
17
1.91
20875--20940
16
3.9
16
79
14
71
25
13
18
42
1.87
21028--21105
23
3.4
23
82
3
86
21
15
23
39
1.91
25582--25652
23
3.1
23
75
0
79
16
16
29
36
1.92
25641--25697
24
2.4
24
87
0
78
21
15
21
42
1.89
26709--26762
25
2.2
25
93
0
90
27
37
1
33
1.68
37862--37895
4
8.5
4
93
0
59
76
0
20
2
0.92
38195--38234
5
7.6
5
94
5
62
0
22
20
57
1.41
40913--40961
20
2.5
20
86
3
64
55
4
10
30
1.52
42494--42570
21
3.7
21
96
0
136
29
25
18
25
1.98
43677--43716
19
2.1
19
90
0
62
35
5
7
52
1.51
46516--47383
434
2.0
433
97
0
1630
37
11
19
31
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50208--50267
23
2.8
20
76
16
66
31
18
15
35
1.91
54076--54113
19
2.0
19
89
0
58
36
5
10
47
1.61
54604--54689
29
2.9
29
83
11
88
48
1
5
44
1.34
54674--54720
23
2.1
22
92
7
78
57
0
2
40
1.11
54761--54814
23
2.3
24
96
3
101
42
0
9
48
1.35
56371--56612
54
4.5
54
90
2
333
35
15
14
34
1.88

Tables:   1

The End!