Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008874.1 Hibiscus syriacus cultivar Beakdansim tig00112111_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58649

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1427--1451
12
2.1
12
100
0
50
0
28
0
72
0.86
1626--1672
24
2.0
24
87
8
69
38
21
14
25
1.92
2342--2710
20
18.5
20
86
4
458
20
18
26
34
1.96
10890--11103
108
2.0
107
91
0
347
39
20
13
26
1.90
13118--13203
41
2.1
41
82
8
104
20
13
20
44
1.86
20835--20975
69
2.0
69
88
0
210
31
14
24
29
1.94
23442--23480
18
2.2
18
100
0
78
23
12
0
64
1.28
26457--26574
2
60.5
2
91
5
197
48
0
0
50
1.06
31898--31955
17
3.4
17
97
0
107
17
41
24
17
1.90
31945--31982
20
1.9
20
94
0
67
18
26
26
28
1.98
52985--53087
31
3.4
31
95
2
190
33
5
6
53
1.52

Tables:   1

The End!