Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008877.1 Hibiscus syriacus cultivar Beakdansim tig00112116_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70397

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6261--6535
80
3.3
80
64
27
194
32
25
17
24
1.97
6164--6753
170
3.5
170
98
0
1126
33
25
17
23
1.96
7375--7418
19
2.3
19
92
4
70
9
43
13
34
1.76
7656--7707
23
2.3
23
90
6
79
25
3
3
67
1.25
11463--11519
24
2.4
24
100
0
114
56
12
19
12
1.67
15273--15332
3
20.0
3
89
0
93
1
36
0
61
1.06
15325--15408
43
1.9
44
90
2
134
28
29
5
35
1.81
23754--23778
3
8.3
3
100
0
50
0
32
0
68
0.90
25006--25123
60
2.0
60
83
3
148
47
1
15
35
1.55
25688--25720
16
2.0
17
88
5
50
33
18
9
39
1.82
26381--26447
22
3.0
22
84
0
98
26
23
23
25
2.00
28731--28816
42
2.0
42
95
0
154
31
26
4
37
1.77
37666--37930
44
6.0
44
89
0
395
26
20
11
40
1.87
38816--38856
20
2.0
20
90
0
64
36
14
4
43
1.67
40752--40788
18
2.2
18
85
9
51
54
10
24
10
1.67
48502--48557
23
2.4
24
81
3
69
55
1
0
42
1.10
49228--49298
31
2.3
30
80
7
81
28
1
0
70
0.96
49250--49302
25
2.1
25
89
6
81
26
0
0
73
0.83
49219--49302
31
2.8
31
73
18
79
28
1
1
69
1.04
58239--58299
2
30.5
2
100
0
122
50
0
0
49
1.00
60756--61240
244
2.0
242
97
0
925
34
20
17
27
1.96
65085--65111
2
13.5
2
100
0
54
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66028--66103
31
2.5
31
86
2
100
34
0
6
59
1.24

Tables:   1

The End!