Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008897.1 Hibiscus syriacus cultivar Beakdansim tig00112169_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67650

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44--103
2
31.0
2
93
6
106
50
0
0
50
1.00
1345--1421
3
25.3
3
79
10
77
58
0
0
41
0.98
1334--1421
21
4.2
22
79
17
107
56
0
0
43
0.99
2404--2488
37
2.3
37
86
6
120
42
20
4
32
1.72
6970--7088
35
3.3
36
84
5
152
43
19
4
32
1.70
7016--7081
21
3.5
21
63
26
56
45
19
6
28
1.74
16243--16296
19
2.8
20
83
8
67
81
3
11
3
0.95
16895--16927
15
2.1
16
88
5
50
57
21
12
9
1.62
19344--19445
42
2.4
42
95
0
186
43
13
24
18
1.87
19386--19641
92
2.8
91
90
2
404
36
16
21
26
1.93
19551--20134
118
5.0
118
91
3
823
35
15
22
26
1.94
19551--20134
235
2.5
234
87
5
826
35
15
22
26
1.94
21469--21526
22
2.8
22
80
15
61
18
5
3
72
1.18
24457--24522
23
2.9
23
95
0
114
25
22
12
39
1.89
26807--26916
40
2.7
41
77
13
129
44
2
1
50
1.26
26896--26970
37
1.9
37
84
10
96
58
1
0
40
1.06
38391--38433
18
2.4
18
88
0
59
16
20
44
18
1.87
41388--41423
18
1.9
19
88
5
56
63
16
0
19
1.30
48935--48985
2
25.5
2
100
0
102
50
0
0
49
1.00
50223--50378
32
4.9
32
73
6
118
32
14
14
38
1.86
51426--51480
21
2.6
21
88
0
74
27
14
23
34
1.94
55342--55397
12
5.0
11
89
8
78
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55349--55397
2
26.0
2
88
12
77
46
0
0
53
1.00
56578--56617
12
3.4
11
86
13
53
27
0
0
72
0.85
56583--56620
13
3.0
13
88
11
53
26
0
0
73
0.83
65142--65180
20
1.9
20
89
5
60
15
25
38
20
1.92

Tables:   1

The End!