Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000089.1 Hibiscus syriacus cultivar Beakdansim tig00000164_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62952

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4564--4629
28
2.3
28
84
10
80
50
12
9
28
1.70
6487--6529
19
2.3
18
80
15
52
51
2
0
46
1.13
6991--7092
31
3.3
30
72
8
87
31
22
16
29
1.96
7750--7782
14
2.4
14
100
0
66
24
21
27
27
1.99
11204--11236
13
2.4
14
90
5
50
39
0
6
54
1.25
14810--14835
2
13.0
2
100
0
52
50
0
0
50
1.00
20595--20628
16
2.1
16
89
10
52
64
5
2
26
1.30
21301--21353
23
2.3
22
78
15
54
56
5
3
33
1.41
53056--53566
254
2.0
253
94
1
891
43
10
15
30
1.81

Tables:   1

The End!