Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000890.1 Hibiscus syriacus cultivar Beakdansim tig00001740_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72972

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3372--3412
22
1.9
22
90
5
66
63
9
0
26
1.25
3500--3720
30
7.5
29
79
12
195
57
11
13
17
1.64
3493--3752
30
8.8
29
79
8
168
56
11
13
18
1.66
3500--3746
59
4.2
59
77
9
216
57
11
13
17
1.65
4748--4903
32
4.9
32
88
3
215
34
22
17
25
1.96
8620--8660
21
2.0
21
90
0
64
34
14
12
39
1.84
11651--11723
36
2.0
36
91
0
119
32
5
30
31
1.80
21242--21492
123
2.0
123
99
0
493
25
25
17
32
1.97
21632--21768
60
2.3
60
83
2
159
32
17
16
34
1.92
28243--28277
9
3.9
9
96
0
61
80
0
17
2
0.84
31883--31918
2
18.0
2
100
0
72
50
0
0
50
1.00
35938--35970
3
11.3
3
87
6
50
60
0
0
39
0.97
35925--35984
6
10.2
6
78
8
52
53
1
1
43
1.20
36274--36467
55
3.6
54
87
6
268
29
25
13
31
1.94
36318--36632
55
5.8
55
83
9
233
25
25
15
33
1.95
36251--36628
110
3.5
109
78
7
306
24
25
15
33
1.95
36444--36631
54
3.5
54
86
5
256
23
25
17
34
1.96
50691--50723
3
11.3
3
87
6
50
60
0
0
39
0.97
50678--50737
6
10.2
6
78
8
52
53
1
1
43
1.20
53278--53309
3
10.7
3
100
0
64
68
0
31
0
0.90
61482--61644
35
4.6
35
79
8
161
36
18
16
28
1.92
61482--61644
71
2.3
70
80
6
186
36
18
16
28
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61648--61713
34
2.0
34
84
3
89
36
24
13
25
1.92
68148--68306
61
2.6
61
83
0
183
30
26
16
26
1.97

Tables:   1

The End!