Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008900.1 Hibiscus syriacus cultivar Beakdansim tig00112177_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45957

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
87--131
14
2.9
15
87
9
56
35
2
0
62
1.08
7143--7178
13
2.6
14
86
8
56
61
0
0
38
0.96
9421--9465
2
22.5
2
100
0
90
51
0
0
48
1.00
10098--10132
14
2.3
16
90
9
56
48
8
5
37
1.58
10636--10686
25
2.0
25
88
7
77
52
0
0
47
1.00
11527--11654
41
3.1
40
70
15
109
29
17
17
34
1.94
11484--11725
82
2.9
83
84
4
303
30
18
18
32
1.95
11585--11710
42
3.1
40
70
14
112
32
18
17
31
1.94
14104--14174
19
3.7
19
100
0
142
35
30
16
16
1.92
15656--16026
55
6.7
55
82
4
367
30
23
15
30
1.96
15649--16026
110
3.4
111
81
3
419
29
23
16
30
1.96
15656--16023
165
2.2
165
84
3
447
30
23
16
29
1.96
17369--17488
8
14.5
8
79
17
122
10
15
0
74
1.12
17369--17488
33
3.6
33
80
15
133
10
15
0
74
1.12
19984--20017
17
2.1
16
88
5
50
76
0
8
14
1.01
20492--20541
24
2.1
24
85
7
66
60
12
2
26
1.43
23559--23602
20
2.2
20
84
4
63
65
0
15
18
1.27
30468--30517
24
2.1
24
85
7
66
60
12
2
26
1.43
36606--36644
21
1.9
20
84
5
51
53
0
5
41
1.23
39202--39469
41
6.6
41
74
10
203
29
20
15
34
1.93
39268--39433
39
4.2
40
78
12
148
25
20
18
34
1.96
39268--39413
78
1.9
77
89
1
229
26
19
18
35
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41712--41752
21
2.0
21
85
0
55
53
12
31
2
1.51

Tables:   1

The End!