Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008902.1 Hibiscus syriacus cultivar Beakdansim tig00112180_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61541

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11519--11569
25
2.0
25
100
0
102
29
15
19
35
1.93
19290--19325
2
18.5
2
94
5
65
50
0
0
50
1.00
23618--23685
35
1.9
36
84
3
93
30
11
16
41
1.84
23766--23815
20
2.5
20
96
0
91
22
26
12
40
1.88
25406--25464
23
2.6
23
91
0
91
42
8
16
32
1.79
25378--25542
89
1.9
87
86
5
233
43
12
10
33
1.77
30561--31977
106
13.4
106
95
0
2431
33
24
18
23
1.97
36970--37017
19
2.5
19
89
0
69
54
8
4
33
1.50
39483--39523
20
2.0
20
90
0
64
29
17
7
46
1.74
43833--43878
22
2.1
22
100
0
92
65
17
8
8
1.45
44088--45246
200
5.8
201
86
2
1559
30
15
14
39
1.87
45680--45725
19
2.4
19
96
0
83
54
10
2
32
1.47
47275--47313
18
2.2
18
95
0
69
7
35
0
56
1.28
48014--48068
24
2.4
23
80
11
69
49
5
1
43
1.36
49987--50824
181
4.6
182
92
1
1348
26
17
13
42
1.87
52743--52781
19
2.1
18
85
4
51
56
17
7
17
1.64
52808--52859
11
4.7
11
90
0
77
42
26
13
17
1.86
55054--55116
11
5.9
11
69
14
51
38
1
3
57
1.24
57797--57834
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!