Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008910.1 Hibiscus syriacus cultivar Beakdansim tig00112207_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73231

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
990--1028
12
3.3
12
85
3
53
0
41
0
58
0.98
2735--2786
27
1.9
27
85
14
72
51
0
0
48
1.00
5998--6062
27
2.3
29
87
10
100
47
33
6
12
1.66
9684--9731
2
25.0
2
91
8
82
50
0
0
50
1.00
10484--10770
145
2.0
143
84
4
380
20
26
20
32
1.98
10520--10795
143
1.9
143
90
2
437
19
27
21
31
1.97
11856--11904
15
3.1
15
76
5
53
26
46
0
26
1.53
11856--11912
17
3.5
16
76
9
62
22
45
0
31
1.53
14175--14224
20
2.5
20
86
0
64
48
12
2
38
1.52
17752--17814
20
3.2
20
69
13
58
26
20
11
41
1.86
18320--18384
28
2.3
29
81
7
71
40
1
1
56
1.18
18696--18727
3
10.7
3
100
0
64
68
0
0
31
0.90
20038--20154
3
39.0
3
80
6
121
60
1
1
35
1.17
20240--20627
139
2.8
139
88
2
560
24
21
18
35
1.96
29517--29576
3
20.3
3
86
10
88
65
0
0
35
0.93
30637--30688
21
2.5
21
100
0
104
26
21
15
36
1.93
33968--34034
29
2.3
29
82
10
82
19
11
11
56
1.66
34100--34181
41
2.0
41
85
2
112
29
15
4
50
1.65
35401--35446
2
23.0
2
82
8
58
52
2
2
43
1.25
37824--38068
105
2.3
108
80
6
282
25
21
15
37
1.93
39317--39406
17
4.9
18
82
16
89
10
11
0
78
0.95
39344--39394
10
5.4
10
81
13
72
7
9
0
82
0.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39335--39406
27
2.7
27
87
8
103
9
9
0
80
0.91
39344--39406
8
7.1
9
77
10
51
9
9
0
80
0.89
50943--50995
2
27.0
2
81
11
65
52
1
1
43
1.23
53872--53913
2
21.0
2
100
0
84
50
0
0
50
1.00
54898--54936
20
2.0
20
94
0
69
43
5
20
30
1.73
55929--55968
20
2.0
21
85
5
55
55
5
10
30
1.54
60846--60881
12
3.0
12
92
8
56
55
0
2
41
1.14
62857--62899
3
14.0
3
81
13
52
65
0
0
34
0.93
62858--62899
13
3.7
12
78
21
54
66
0
0
33
0.92
63044--64227
254
4.6
256
87
3
1593
33
17
15
33
1.91
63748--63834
41
2.1
42
84
2
113
32
21
18
27
1.97
66336--66377
15
2.6
16
82
17
52
61
0
4
33
1.17
66935--66963
14
2.0
15
93
6
51
62
0
0
37
0.96
68240--68308
3
22.7
3
79
8
77
63
4
1
30
1.22
68454--68712
82
3.1
82
87
3
351
24
18
19
36
1.95
69034--69134
42
2.4
41
82
6
123
33
20
22
22
1.97
68772--69237
249
1.9
248
89
3
722
34
17
16
31
1.93
71548--71601
2
27.5
2
96
3
101
48
0
0
51
1.00
71574--71809
105
2.2
106
88
5
354
34
15
11
38
1.84

Tables:   1

The End!