Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008911.1 Hibiscus syriacus cultivar Beakdansim tig00112211_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76582

Tables:   1   

This is table  1  of  1  ( 48 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
138--526
124
3.1
124
85
3
500
27
15
25
31
1.96
517--726
64
3.3
64
86
0
285
31
12
20
35
1.90
1918--1942
12
2.1
12
100
0
50
40
16
0
44
1.47
2645--2702
21
2.7
22
72
15
59
22
6
8
62
1.48
2965--3019
28
2.0
28
89
3
85
21
9
0
69
1.16
5229--5282
22
2.6
20
78
16
65
57
9
9
24
1.59
6340--6495
83
1.9
84
84
1
215
25
16
23
35
1.95
6742--6972
64
3.6
64
88
2
313
29
13
22
35
1.92
9098--9282
92
2.0
92
95
0
334
45
15
9
29
1.78
11078--11103
7
3.7
7
100
0
52
42
0
0
57
0.98
14894--14998
37
2.8
37
83
0
138
43
11
13
31
1.79
15443--15467
2
12.5
2
100
0
50
48
0
0
52
1.00
15660--15751
29
3.2
27
72
19
71
31
2
3
63
1.23
15700--15826
8
14.7
9
84
11
121
43
0
0
55
1.11
15673--15842
6
32.0
5
82
15
88
39
1
1
57
1.17
15732--15823
2
46.5
2
95
2
168
47
0
0
52
1.00
17111--17147
19
1.9
19
89
10
58
8
24
0
67
1.17
20576--20656
7
11.6
7
78
10
76
80
4
13
1
0.94
20582--20626
24
1.9
24
90
4
74
80
4
15
0
0.87
20570--20654
20
4.1
20
77
14
82
78
5
14
1
0.99
22255--23211
317
3.0
317
91
1
1515
34
25
18
22
1.96
22255--23211
106
9.0
106
92
0
1504
34
25
18
22
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23961--24057
37
2.6
37
90
0
149
41
16
11
30
1.84
24791--24909
25
4.7
27
68
24
82
32
4
0
63
1.14
24935--25003
31
2.2
30
80
7
75
23
7
1
68
1.23
24992--25074
24
3.5
24
68
15
64
20
8
4
66
1.37
25605--25730
39
3.2
40
82
5
150
35
25
7
30
1.85
28822--28855
2
17.0
2
100
0
68
50
0
0
50
1.00
31157--31234
2
39.0
2
100
0
156
50
0
0
50
1.00
32000--32058
24
2.4
25
80
11
68
38
3
6
50
1.45
32711--32755
3
15.0
3
95
0
81
33
2
0
64
1.06
34009--34044
17
2.1
17
100
0
72
33
11
36
19
1.87
39962--40045
28
3.0
28
96
0
150
33
3
26
36
1.74
48742--48787
2
23.0
2
100
0
92
50
0
0
50
1.00
50375--50446
30
2.4
30
97
0
135
47
2
43
6
1.45
51539--51786
138
1.8
137
86
5
367
56
5
9
28
1.53
51790--51894
48
2.2
46
82
14
117
60
0
4
33
1.24
53640--54414
105
7.4
105
98
0
1505
22
17
25
34
1.96
54603--54663
12
5.2
12
92
7
108
9
0
9
80
0.91
54607--54660
11
4.8
11
95
4
99
7
0
7
85
0.75
54603--54663
23
2.7
23
100
0
122
9
0
9
80
0.91
55194--55318
64
2.0
64
80
0
142
13
20
13
52
1.74
64686--64729
20
2.2
20
88
8
63
72
2
6
18
1.17
66456--66494
2
19.5
2
89
0
60
53
2
0
43
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72381--72416
10
3.5
11
85
14
51
63
0
0
36
0.94
73073--73728
182
3.6
182
87
2
858
43
13
15
26
1.84
74111--74155
19
2.4
19
92
3
74
42
0
20
37
1.52
75401--75455
24
2.5
22
77
16
60
41
1
7
49
1.41

Tables:   1

The End!