Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008916.1 Hibiscus syriacus cultivar Beakdansim tig00112220_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75979

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5858--5936
19
4.2
19
80
7
90
15
29
30
25
1.96
5843--5936
9
10.0
9
83
8
98
13
28
30
26
1.94
5843--5930
38
2.3
38
98
0
167
13
27
31
27
1.94
5962--5998
17
2.2
17
90
0
56
16
43
24
16
1.87
13121--13221
10
10.6
10
81
9
122
18
23
31
25
1.98
13120--13221
19
5.4
19
97
2
172
18
23
32
25
1.97
13101--13227
29
4.5
27
79
15
116
18
25
29
25
1.98
20275--20343
9
7.3
9
73
9
57
15
24
28
30
1.96
22529--22577
5
9.8
5
82
12
57
4
22
53
20
1.63
22522--22566
22
2.0
22
100
0
90
8
22
51
17
1.73
22574--22623
19
2.6
19
84
6
66
26
28
28
18
1.98
35437--35480
22
2.0
22
95
0
79
11
22
47
18
1.80
35437--35474
12
3.3
12
78
14
53
13
23
44
18
1.85
35442--35493
17
2.9
18
77
8
61
7
23
50
19
1.73
35464--35500
18
2.1
18
89
0
56
8
27
45
18
1.77
35488--35547
10
6.3
9
81
9
66
28
30
28
13
1.94
35494--35556
9
6.7
9
78
10
63
28
30
26
14
1.95
35494--35556
19
3.3
19
78
12
76
28
30
26
14
1.95
58227--58252
12
2.2
12
100
0
52
42
7
0
50
1.31

Tables:   1

The End!