Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000892.1 Hibiscus syriacus cultivar Beakdansim tig00001746_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61379

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12724--12802
40
1.9
42
87
5
117
39
11
10
39
1.75
13224--13270
14
3.4
14
91
2
69
48
19
0
31
1.49
14254--14319
28
2.3
29
78
5
80
40
6
10
42
1.64
27053--27093
22
1.9
21
90
5
64
63
0
4
31
1.15
28480--28545
20
3.3
19
70
16
53
37
4
1
56
1.29
37592--37637
23
2.0
23
91
8
76
26
17
13
43
1.85
39163--39351
27
6.8
28
68
17
124
25
22
27
24
2.00
39163--39408
55
4.4
55
81
7
282
25
22
26
26
2.00
39109--39408
54
5.4
55
79
9
267
26
22
25
25
2.00
39528--39682
81
1.9
81
87
0
229
30
20
30
18
1.97
45604--45664
26
2.3
26
85
2
77
24
1
14
59
1.45
53745--53769
6
4.2
6
100
0
50
84
0
0
16
0.63

Tables:   1

The End!