Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008931.1 Hibiscus syriacus cultivar Beakdansim tig00112237_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67833

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13017--13057
21
2.0
21
95
0
73
73
0
0
26
0.84
13017--13057
11
3.9
10
84
9
55
73
0
0
26
0.84
13613--13658
20
2.2
21
88
3
67
15
8
8
67
1.41
20168--20207
16
2.6
16
88
4
55
32
22
10
35
1.87
20788--20841
21
2.6
21
84
0
72
35
16
35
12
1.87
25069--25122
23
2.3
23
87
9
74
18
7
12
61
1.54
27981--28023
12
3.6
12
93
0
68
41
20
16
20
1.90
28949--29023
35
2.1
35
82
9
89
48
1
2
48
1.24
34004--34042
5
8.0
5
82
5
53
38
0
5
56
1.22
34041--34080
21
1.9
21
89
0
62
45
30
5
20
1.72
34069--34192
14
8.9
14
68
15
60
45
27
1
25
1.62
36715--36787
27
2.7
26
75
8
65
27
1
4
67
1.17
48645--48675
16
1.9
16
100
0
62
38
6
3
51
1.44
48645--48693
19
2.8
17
87
9
64
40
8
2
48
1.44
48986--49437
114
4.0
114
94
0
742
34
15
18
31
1.93
50509--50569
16
3.6
16
72
18
52
47
13
21
18
1.82
50497--50567
36
2.0
36
100
0
142
47
11
21
19
1.80
50561--50806
112
2.2
112
87
5
363
36
13
19
30
1.90
50323--50793
237
2.0
241
91
2
763
37
14
19
29
1.91
50124--50808
113
6.0
111
81
10
717
37
14
19
28
1.91
51080--51199
3
40.0
3
88
6
163
39
0
0
60
0.97
51085--51199
42
2.7
42
95
2
205
40
0
0
60
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57875--57912
17
2.2
17
86
9
51
5
15
2
76
1.08
58097--58136
20
2.0
20
85
9
55
45
0
0
55
0.99
58631--58707
17
4.0
18
73
20
59
32
0
1
66
1.00
58631--58707
29
2.6
31
82
9
92
32
0
1
66
1.00
58663--58714
4
12.8
4
76
11
52
30
0
0
69
0.89
59602--59651
26
2.0
25
88
4
73
34
8
4
54
1.49
59628--59688
21
3.1
19
73
26
56
31
6
3
59
1.39

Tables:   1

The End!