Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008938.1 Hibiscus syriacus cultivar Beakdansim tig00112256_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61815

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
870--931
29
2.1
29
96
0
115
14
19
24
41
1.88
4300--4451
73
2.1
72
93
4
261
26
6
17
50
1.70
7748--7789
22
2.0
22
90
4
68
35
4
4
54
1.42
9944--10018
35
2.1
37
87
5
109
38
14
16
30
1.88
10701--10746
24
1.9
24
82
8
58
34
4
0
60
1.16
14074--14132
20
2.8
20
81
18
68
77
8
11
1
1.05
14114--14143
14
2.1
14
100
0
60
86
6
0
6
0.70
14104--14141
20
1.9
20
88
0
58
84
7
2
5
0.86
14751--14801
22
2.3
22
96
0
93
35
27
11
25
1.91
15668--15777
37
3.0
37
91
2
177
26
22
12
38
1.90
15686--16041
102
3.5
101
92
1
586
29
20
12
37
1.90
15804--15976
37
4.9
37
69
21
129
27
20
13
37
1.91
15926--16106
65
2.8
65
93
0
308
30
20
12
36
1.89
15824--16141
167
1.9
169
92
2
534
29
20
12
36
1.90
15670--16141
204
2.3
199
80
8
576
29
20
13
37
1.91
16214--16285
37
1.9
37
82
0
90
26
22
11
40
1.87
16608--16944
160
2.1
160
96
0
611
32
25
21
20
1.98
16768--17487
109
6.9
105
79
7
653
32
24
20
22
1.98
17948--18047
35
2.7
35
86
6
119
38
15
16
31
1.89
18493--18526
2
17.0
2
93
0
59
47
0
0
52
1.00
18725--18758
16
2.1
16
88
0
50
32
5
0
61
1.20
18775--18816
17
2.5
16
85
11
57
45
2
0
52
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22340--22382
19
2.2
20
84
12
54
34
11
18
34
1.87
22552--22613
3
20.0
3
86
6
88
32
1
0
66
1.02
22552--22613
19
3.3
18
86
8
88
32
1
0
66
1.02
28772--28839
30
2.3
30
84
0
82
42
19
5
32
1.75
35962--36001
17
2.2
17
91
8
62
82
0
12
5
0.82
35929--36003
19
3.9
19
70
8
71
77
0
14
8
0.98
37169--37243
39
1.9
38
81
2
87
21
37
18
22
1.94
36943--37365
133
3.2
134
85
4
563
26
30
18
24
1.98
37305--37421
43
2.8
40
74
7
119
23
32
18
24
1.97
37578--37630
3
17.0
3
84
7
70
32
1
0
66
1.03
37576--37630
16
3.5
16
85
11
78
32
1
0
65
1.03
37578--37630
19
2.8
18
83
10
70
32
1
0
66
1.03
37580--37627
10
5.0
10
80
7
55
33
2
0
64
1.05
43131--43166
18
2.0
18
88
0
54
19
22
33
25
1.97
43146--43221
23
3.2
23
88
3
107
23
21
21
34
1.97
59635--59715
29
2.5
33
73
19
80
62
7
6
23
1.44
59650--59752
29
3.5
29
80
14
104
61
8
9
20
1.54
61447--61798
85
4.2
83
80
8
363
26
20
19
34
1.96
61488--61798
85
3.7
85
83
5
391
24
20
19
35
1.96

Tables:   1

The End!