Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008946.1 Hibiscus syriacus cultivar Beakdansim tig00112267_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91911

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4910--4958
18
2.6
19
78
15
57
34
16
6
42
1.73
5308--5348
17
2.4
17
95
0
73
21
39
4
34
1.75
5510--5539
16
1.9
15
93
6
51
6
33
0
60
1.23
5724--5748
13
1.9
13
100
0
50
80
0
20
0
0.72
7997--8035
20
2.0
20
90
5
62
30
12
10
46
1.75
9002--9052
19
2.6
20
90
3
77
33
17
5
43
1.73
9406--9446
17
2.4
17
91
0
64
24
36
4
34
1.77
9419--9465
23
2.0
24
83
8
60
23
36
4
36
1.75
18326--18379
24
2.2
25
80
6
58
29
22
14
33
1.94
28922--28974
20
2.7
19
88
5
79
35
15
5
43
1.70
29317--29363
23
2.0
23
84
8
60
21
44
4
29
1.71
50472--50511
19
2.0
20
85
4
55
62
0
17
20
1.33
50924--50975
19
2.6
21
90
6
81
46
5
13
34
1.67
54341--54380
19
2.0
20
85
4
55
62
0
17
20
1.33
67082--67141
30
2.0
31
86
3
86
28
8
10
53
1.63
68817--68865
25
2.0
25
92
8
82
79
4
14
2
0.97
68817--68863
6
7.8
6
79
9
51
78
4
14
2
0.99
71223--71251
14
2.1
14
100
0
58
34
10
13
41
1.79
73483--73529
19
2.6
18
83
12
60
65
0
14
19
1.26
73939--73981
19
2.2
20
87
4
61
48
6
9
34
1.62
74898--74957
30
2.0
31
83
3
77
53
8
10
28
1.63
77785--77827
14
3.1
14
86
3
52
27
39
0
32
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
78837--78863
14
1.9
14
100
0
54
40
14
14
29
1.86
80604--80654
20
2.6
20
84
3
68
39
11
5
43
1.66
81490--81528
6
6.8
6
85
8
55
79
2
17
0
0.84
81490--81536
11
4.2
11
86
5
67
78
2
19
0
0.85
81490--81536
17
2.8
17
78
12
60
78
2
19
0
0.85
84676--84720
19
2.3
20
84
3
56
40
15
6
37
1.74
85493--85532
13
3.1
13
85
0
62
82
2
12
2
0.87
85493--85532
6
6.3
6
83
11
53
82
2
12
2
0.87
87466--87519
24
2.3
23
81
9
65
61
14
16
7
1.55

Tables:   1

The End!