Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008947.1 Hibiscus syriacus cultivar Beakdansim tig00112270_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26025

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6933--7019
32
2.8
32
77
7
97
20
37
26
14
1.92
7066--7197
32
4.2
32
91
3
196
18
37
30
14
1.90
7064--7196
63
2.1
63
87
4
196
18
36
30
14
1.90
7161--7447
156
1.8
156
88
5
447
15
36
35
12
1.85
7243--7376
62
2.1
63
95
2
252
13
39
36
10
1.79
7133--7353
94
2.4
94
70
11
218
16
37
34
12
1.86
7411--7540
32
4.2
32
86
4
160
18
36
28
16
1.92
15791--15878
32
2.8
32
80
3
106
20
37
27
14
1.92
15924--16055
32
4.2
32
92
2
196
18
37
30
14
1.90
16102--16236
62
2.2
63
95
2
254
13
39
37
10
1.79
16140--16240
32
3.2
31
65
21
84
12
39
37
9
1.77
16269--16401
32
4.2
32
87
2
178
18
36
30
15
1.92
16269--16401
63
2.1
65
85
2
180
18
36
30
15
1.92
16165--16550
95
4.1
95
72
10
349
16
34
36
12
1.87
15864--16519
346
1.9
346
94
1
1163
17
34
34
13
1.88
24788--24916
29
4.2
30
84
12
156
18
37
29
13
1.90
24789--24916
31
4.2
31
85
9
156
18
38
28
14
1.90
25038--25168
30
4.2
32
86
3
160
18
36
29
16
1.92
25137--25315
94
1.9
94
89
3
281
16
35
36
11
1.86

Tables:   1

The End!