Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008948.1 Hibiscus syriacus cultivar Beakdansim tig00112271_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81999

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1434--1475
19
2.2
20
91
4
68
45
7
9
38
1.64
3322--3364
19
2.2
20
87
4
61
48
6
9
34
1.62
17882--17920
16
2.4
16
91
0
69
10
12
10
66
1.44
23502--23544
19
2.2
20
87
4
61
48
6
6
37
1.57
25474--25516
19
2.2
20
87
4
61
48
6
9
34
1.62
30163--30242
35
2.2
37
91
4
128
27
3
37
31
1.74
33538--33587
24
2.0
25
85
11
68
64
0
16
20
1.30
33806--33856
11
5.0
10
76
11
50
0
11
5
82
0.83
33808--33855
21
2.2
21
85
10
62
0
10
6
83
0.81
34231--34310
35
2.2
37
91
4
128
27
3
37
31
1.74
37304--37346
19
2.2
20
87
4
61
48
6
9
34
1.62
42742--42776
14
2.5
13
90
9
52
0
11
11
77
1.00
42734--42793
23
2.7
22
79
5
66
0
6
8
85
0.76
44820--44899
35
2.2
37
88
4
119
28
3
36
31
1.75
48633--48675
19
2.2
20
87
4
61
48
6
9
34
1.62
53513--53549
16
2.3
17
86
9
51
67
5
2
24
1.25
57417--57477
26
2.3
26
80
5
70
6
4
14
73
1.20
57436--57476
8
4.9
8
88
11
64
0
4
12
82
0.81
57436--57476
18
2.4
16
92
8
64
0
4
12
82
0.81
58238--58274
16
2.3
17
86
9
51
67
5
2
24
1.25
58250--58354
50
2.3
45
81
15
110
54
13
0
31
1.45
61825--61850
10
2.6
10
100
0
52
19
30
0
50
1.48
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62051--62107
30
1.9
30
85
7
80
77
8
14
0
0.99
68956--69009
24
2.2
25
84
12
69
16
16
9
57
1.64
69029--69053
11
2.3
11
100
0
50
16
36
8
40
1.77
73678--73757
35
2.2
37
91
4
128
31
37
3
27
1.74
79361--79437
35
2.1
37
90
4
122
31
36
3
28
1.75

Tables:   1

The End!