Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000896.1 Hibiscus syriacus cultivar Beakdansim tig00001759_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46360

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4073--4112
20
1.9
22
85
10
57
50
2
2
45
1.28
6309--6384
31
2.5
31
84
0
89
35
17
15
31
1.91
7030--7069
21
1.9
21
94
0
71
25
20
27
27
1.99
10237--10285
3
15.7
3
79
8
53
63
0
0
36
0.95
10398--10539
59
2.4
59
75
11
153
33
18
14
34
1.90
13677--13769
44
2.1
44
97
0
177
44
6
27
21
1.77
13696--13763
21
3.1
21
64
15
57
48
8
23
19
1.76
14576--14611
18
1.9
19
88
5
56
55
2
0
41
1.14
21097--21153
25
2.3
25
90
3
89
26
12
17
43
1.84
21746--21846
49
2.1
49
100
0
202
33
17
14
33
1.91
27602--27845
84
2.9
84
85
1
310
25
20
23
31
1.98
27997--28184
36
5.1
35
86
5
241
39
13
21
25
1.90
27951--28184
73
3.4
68
82
8
224
38
13
22
25
1.90
28004--28188
73
2.5
73
91
0
300
37
14
22
25
1.92
28275--28519
124
2.0
124
91
0
400
24
17
24
32
1.97
28556--28906
106
3.3
106
87
0
504
23
18
25
33
1.97
32930--32972
22
1.9
23
85
4
61
79
0
4
16
0.90
34687--34745
31
1.9
31
96
0
109
42
6
8
42
1.61
34770--34812
22
2.0
22
100
0
86
51
13
0
34
1.42
34772--34820
22
2.2
22
88
3
71
55
14
0
30
1.40
34760--35230
54
8.6
54
76
15
466
53
12
0
34
1.39
34792--35011
32
7.7
32
71
24
179
53
13
0
32
1.40
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34822--34892
22
3.1
22
75
16
81
53
16
0
29
1.44
34760--35176
166
2.5
166
93
0
717
53
12
0
34
1.38
34936--34978
22
2.0
22
90
0
68
53
13
0
32
1.41
35043--35099
18
3.4
18
69
18
59
54
12
0
33
1.38
35038--35231
32
6.7
32
76
21
221
52
11
0
36
1.39
34904--35301
220
1.8
220
94
1
717
53
12
0
34
1.39
35156--35198
22
2.0
22
100
0
86
51
13
0
34
1.42
35158--35206
22
2.2
22
88
3
71
55
14
0
30
1.40
35038--35301
86
3.1
86
85
8
298
52
12
0
35
1.39
34760--35256
166
3.0
163
85
9
618
53
12
0
33
1.39
35241--35338
22
4.3
22
68
7
79
51
11
0
37
1.38
35281--35316
15
2.5
15
95
4
65
58
0
0
41
0.98
35201--35325
47
2.7
45
79
15
139
52
13
0
33
1.41

Tables:   1

The End!