Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008963.1 Hibiscus syriacus cultivar Beakdansim tig00112304_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30200

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6715--6799
33
2.6
32
84
1
107
21
34
28
16
1.95
6578--7158
168
3.4
170
94
1
999
17
33
32
16
1.92
6883--6967
33
2.6
33
88
1
118
17
35
30
16
1.92
7052--7274
33
6.6
33
75
13
186
16
35
30
16
1.91
7022--7237
65
3.2
65
71
16
222
14
36
30
18
1.91
7052--7274
32
6.6
32
76
15
182
16
35
30
16
1.91
7009--7296
138
2.1
138
98
0
549
15
34
32
17
1.91
12669--12700
11
2.9
11
100
0
64
9
43
37
9
1.69
18936--18967
11
2.9
11
100
0
64
9
43
37
9
1.69
27009--27093
33
2.6
32
83
1
107
21
32
28
17
1.96
27261--27480
33
6.6
33
73
17
177
16
35
30
16
1.91
27253--27448
104
1.9
104
82
8
247
15
35
32
16
1.91
27209--27496
135
2.1
135
92
3
499
16
33
32
17
1.92
27865--27896
11
2.9
11
100
0
64
9
43
37
9
1.69

Tables:   1

The End!