Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008970.1 Hibiscus syriacus cultivar Beakdansim tig00112313_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  124070

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8412--8453
19
2.2
19
87
8
59
16
19
0
64
1.30
23276--23313
20
1.9
20
84
10
51
18
21
0
60
1.36
28868--28905
20
1.9
20
84
10
51
18
21
0
60
1.36
31405--31437
16
2.1
16
100
0
66
33
36
6
24
1.80
37600--37645
21
2.2
21
88
7
67
41
15
6
36
1.73
39739--39775
14
2.6
14
86
0
56
32
0
40
27
1.57
40227--40263
14
2.6
14
86
0
56
32
0
40
27
1.57
40410--40452
19
2.2
20
87
4
61
48
6
9
34
1.62
43807--43844
20
1.9
20
84
10
51
18
21
0
60
1.36
44136--44160
5
5.0
5
100
0
50
80
0
20
0
0.72
48338--48375
20
1.9
20
84
10
51
18
21
0
60
1.36
49674--49836
90
1.8
89
94
1
290
44
6
12
36
1.68
51862--51907
15
2.9
15
81
18
58
6
32
0
60
1.22
55170--55485
158
2.0
158
98
1
616
40
19
8
31
1.81
66319--66387
19
3.6
19
76
7
61
0
10
13
76
1.01
66337--66400
28
2.3
28
89
5
94
0
6
10
82
0.82
66326--66390
19
3.4
18
83
12
76
0
9
10
80
0.92
66326--66392
20
3.3
20
91
4
100
0
8
11
79
0.95
66337--66388
8
5.9
8
75
20
50
0
7
9
82
0.84
68962--69001
19
2.1
19
100
0
80
40
0
17
42
1.49
71002--71037
19
1.9
18
88
5
54
41
5
13
38
1.68
75151--75179
15
2.0
15
93
6
51
0
20
3
75
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
81198--81230
17
1.9
17
100
0
66
42
0
30
27
1.56
81528--81596
33
2.1
33
83
5
86
31
1
36
30
1.67
85470--85538
33
2.1
33
83
5
86
31
1
36
30
1.67
88760--88799
19
2.0
20
90
4
64
20
15
0
65
1.28
89070--89112
19
2.4
18
82
17
54
74
2
18
4
1.10
94697--94722
5
5.2
5
100
0
52
23
57
19
0
1.40
94738--94763
5
5.2
5
100
0
52
23
57
19
0
1.40
97567--97600
16
2.2
16
89
5
52
0
20
0
79
0.73
97589--97642
23
2.2
25
87
6
76
9
16
12
61
1.56
103535--103614
35
2.2
37
91
4
128
27
3
37
31
1.74
109999--110041
15
2.9
15
82
6
52
16
9
4
69
1.31
110615--110671
9
6.4
9
75
20
50
78
1
17
1
0.91
110615--110671
5
11.8
5
72
20
50
78
1
17
1
0.91
110614--110675
19
3.4
18
73
13
65
79
1
17
1
0.90
110626--110686
29
2.1
30
84
9
81
75
3
16
4
1.11
118299--118350
19
2.6
21
90
6
81
46
5
13
34
1.67
119124--119164
18
2.2
19
91
8
66
41
9
26
21
1.84
119274--119333
30
2.0
31
83
3
77
55
10
8
26
1.61
121733--121786
24
2.3
23
83
3
72
1
20
1
75
0.98
122499--122547
18
2.6
20
81
15
68
48
6
12
32
1.65

Tables:   1

The End!