Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008971.1 Hibiscus syriacus cultivar Beakdansim tig00112317_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53950

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
231--274
21
2.1
21
83
8
54
20
13
22
43
1.87
4861--4899
20
2.0
20
85
10
53
28
28
15
28
1.96
10206--10277
22
3.5
20
78
9
74
29
16
26
27
1.97
10240--10281
20
2.3
18
81
18
52
30
14
28
26
1.95
10693--11105
59
7.0
59
87
4
582
33
11
18
36
1.86
10693--11140
119
3.8
118
87
5
604
34
10
18
35
1.86
10703--11099
178
2.2
178
91
2
629
33
11
18
36
1.86
17822--18233
60
7.0
59
89
2
605
33
11
19
35
1.87
17822--18233
119
3.5
119
90
2
625
33
11
19
35
1.87
19418--19456
2
19.5
2
100
0
78
51
0
0
48
1.00
29505--29586
40
2.0
40
92
0
137
32
25
17
24
1.96
31797--31862
34
1.9
34
87
0
96
27
24
7
40
1.82
35511--36905
700
2.0
693
97
1
2641
38
9
13
39
1.77
37025--37584
188
3.0
186
83
5
673
39
11
16
32
1.84
39265--39298
2
17.0
2
100
0
68
50
0
0
50
1.00
39379--39430
21
2.6
21
81
6
54
65
0
5
28
1.16
40285--40335
21
2.4
21
83
0
57
64
0
5
29
1.17
41182--41233
21
2.6
21
81
6
54
65
0
5
28
1.16
39279--41980
898
3.0
902
97
1
5128
35
19
17
27
1.94
42299--42335
17
2.2
17
90
0
56
54
0
0
45
1.00
42659--43807
105
10.9
105
96
1
2067
21
18
25
34
1.96
42659--43807
211
5.5
210
95
2
2067
21
18
25
34
1.96

Tables:   1

The End!