Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008974.1 Hibiscus syriacus cultivar Beakdansim tig00112322_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47767

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8562--8606
14
3.1
15
84
15
60
68
0
0
31
0.89
9522--9605
20
4.2
20
84
6
107
59
9
5
25
1.51
9522--9605
41
2.1
40
84
6
107
59
9
5
25
1.51
10100--10274
60
3.0
58
84
5
192
30
4
16
48
1.64
10105--10320
58
3.7
56
81
7
191
32
3
15
48
1.62
10098--10293
29
6.7
29
84
6
180
31
3
16
48
1.63
10114--10293
87
2.0
88
80
4
202
32
3
16
47
1.62
10190--10309
29
4.2
29
87
2
118
35
2
17
45
1.62
16925--16992
24
3.0
23
85
12
88
61
10
5
22
1.49
16946--16992
21
2.2
21
92
7
78
63
10
6
19
1.47
17508--17652
29
4.9
29
85
8
159
31
2
15
50
1.59
17507--17681
60
3.0
59
85
5
203
31
3
16
48
1.63
17512--17709
58
3.4
57
84
7
202
33
3
15
47
1.63
17572--17700
29
4.4
29
83
11
158
34
3
16
45
1.65
17598--17716
29
4.2
29
84
6
100
36
2
16
43
1.62
24554--24612
29
2.0
29
100
0
118
23
13
13
49
1.78
29240--29298
29
2.0
29
100
0
118
23
13
13
49
1.78
35329--35403
35
2.1
35
90
0
114
33
0
21
45
1.52
37930--37967
3
12.7
3
100
0
76
31
0
0
68
0.90
41460--41521
15
4.2
15
79
2
63
9
11
64
14
1.49
41460--41521
30
2.1
30
87
3
90
9
11
64
14
1.49
43472--43512
22
1.9
22
85
5
57
12
12
12
63
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46614--46654
20
2.0
20
86
9
57
65
0
34
0
0.93

Tables:   1

The End!