Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008975.1 Hibiscus syriacus cultivar Beakdansim tig00112323_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  112054

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6997--7035
12
3.2
12
89
7
60
69
2
0
28
1.02
7002--7032
13
2.4
13
100
0
62
74
0
0
25
0.82
25537--25598
18
3.2
18
70
24
54
24
32
19
24
1.98
27099--27240
64
2.2
63
81
9
155
28
16
20
33
1.95
32052--32212
64
2.5
63
82
9
175
28
18
20
32
1.96
42505--42532
2
14.0
2
100
0
56
50
0
0
50
1.00
43119--43177
31
1.9
31
82
6
75
57
3
1
37
1.25
44289--44345
30
1.9
30
89
3
89
15
12
10
61
1.57
59897--59931
17
2.1
17
88
0
52
54
8
8
28
1.60
59958--60002
20
2.2
20
80
0
54
33
24
6
35
1.82
83011--83040
15
2.0
15
93
0
51
53
3
6
36
1.44
96400--96452
29
1.9
26
85
11
70
58
0
1
39
1.09
96448--96508
24
2.7
23
82
12
72
57
0
4
37
1.20
96505--96539
16
2.3
16
90
9
56
45
0
0
54
0.99
96754--96837
39
2.2
39
82
8
100
45
1
17
35
1.57
103263--103398
56
2.3
59
80
7
154
41
5
22
31
1.75

Tables:   1

The End!