Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008978.1 Hibiscus syriacus cultivar Beakdansim tig00112335_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38115

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5311--5563
93
2.7
92
81
7
285
32
19
17
30
1.95
6366--7297
85
11.1
84
84
4
1013
33
23
18
24
1.97
6366--7247
169
5.3
169
86
3
1066
33
23
19
24
1.97
6367--7298
337
2.8
337
83
3
1094
33
23
18
24
1.97
8677--8767
14
6.7
15
75
17
67
43
2
0
53
1.12
8684--8763
3
28.7
3
72
14
55
42
2
0
55
1.13
8684--8747
33
2.0
31
87
6
92
40
3
0
56
1.15
8683--8730
5
9.4
5
82
13
62
39
2
0
58
1.10
8709--8763
22
2.5
22
75
0
65
43
1
0
54
1.10
17001--17109
12
9.3
12
65
13
57
80
0
10
8
0.94
18366--18752
55
7.2
55
86
4
549
29
14
27
28
1.95
18366--18752
108
3.6
109
91
3
624
29
14
27
28
1.95
18746--19290
52
10.6
52
91
3
863
28
16
25
30
1.97
23775--23835
3
21.0
3
77
12
65
67
1
3
27
1.16
23780--23842
29
2.2
30
88
8
103
66
3
4
25
1.26
26920--26979
31
1.9
32
89
3
95
31
11
10
46
1.73
27168--27213
21
2.1
21
88
4
65
45
4
15
34
1.66
35572--35633
2
31.5
2
90
9
101
51
0
1
46
1.10

Tables:   1

The End!