Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008991.1 Hibiscus syriacus cultivar Beakdansim tig00112358_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64580

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3571--4137
85
6.7
85
84
1
652
35
22
17
24
1.95
3571--4137
170
3.3
169
83
1
722
35
22
17
24
1.95
3571--4205
85
7.5
84
82
3
536
36
22
17
24
1.95
3590--4222
256
2.5
256
80
1
617
35
21
17
25
1.95
6136--6189
28
1.9
28
100
0
108
38
16
11
33
1.84
6137--6196
28
2.1
28
93
0
102
40
15
10
35
1.80
6223--6264
4
10.8
4
84
5
59
21
0
4
73
1.01
6316--6350
15
2.2
16
90
5
54
20
0
2
77
0.90
11042--11109
35
1.9
35
88
5
102
39
26
1
32
1.65
11745--11771
11
2.5
11
100
0
54
29
7
7
55
1.55
18413--18463
14
3.6
14
100
0
102
23
35
0
41
1.55
19521--19708
45
4.1
46
84
5
240
32
21
6
39
1.79
23755--23814
9
6.1
9
78
14
57
0
15
1
83
0.73
23757--23814
16
3.8
16
88
4
84
0
15
1
82
0.74
26537--26722
46
4.1
45
87
2
257
32
20
7
39
1.81
26537--26722
91
2.1
90
88
3
275
32
20
7
39
1.81
26810--26902
40
2.3
40
96
0
168
23
24
29
22
1.99
26810--26918
40
2.7
40
89
0
137
23
25
26
23
2.00
28363--28495
29
4.6
29
77
6
126
45
9
6
39
1.60
28363--28494
58
2.3
59
78
6
144
46
9
6
38
1.60
28450--28543
28
3.3
28
83
7
118
43
14
1
40
1.53
31951--32009
31
2.0
30
83
12
77
25
0
20
54
1.45
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33645--33726
29
2.8
29
94
1
137
32
14
9
42
1.79
38412--38493
29
2.8
29
94
1
137
32
14
9
42
1.79
47754--47815
27
2.3
27
83
5
72
41
6
3
48
1.45
48707--48839
44
3.0
44
96
0
248
29
24
3
42
1.69
49920--49978
23
2.8
21
78
12
66
54
15
13
16
1.72
55530--55588
23
2.6
22
80
17
68
50
15
25
8
1.71
56479--56595
32
3.4
33
71
24
107
27
0
10
61
1.34
56461--56643
73
2.5
73
90
5
278
27
1
12
59
1.40
58608--58648
21
2.0
21
85
9
57
24
24
12
39
1.89
60553--60598
16
2.8
16
86
6
56
21
4
2
71
1.14

Tables:   1

The End!